a list of Bayesian MCMC samples More...
#include <mclist.h>
Inheritance diagram for MCMCList:
Public Member Functions | |
| MCMCList (unsigned int N, unsigned int nprm, unsigned int nblocks) | |
| void | setppData (unsigned int i, const std::vector< int > &ppdata, double ppdeviance) |
| set up MCMCList | |
| std::vector< int > | getppData (unsigned int i) const |
| get a posterior predictive data sample | |
| int | getppData (unsigned int i, unsigned int j) const |
| double | getppDeviance (unsigned int i) const |
| get deviance associated with a posterior predictive sample | |
| void | setppRpd (unsigned int i, double Rpd) |
| double | getppRpd (unsigned int i) const |
| void | setppRkd (unsigned int i, double Rkd) |
| double | getppRkd (unsigned int i) const |
| void | setRpd (unsigned int i, double Rpd) |
| double | getRpd (unsigned int i) const |
| void | setRkd (unsigned int i, double Rkd) |
| double | getRkd (unsigned int i) const |
| unsigned int | getNblocks (void) const |
| get the number of blocks | |
| void | setlogratio (unsigned int i, unsigned int j, double logratio) |
| set the log posterior ratio for sample i and block j | |
| double | getlogratio (unsigned int i, unsigned int j) const |
| get the log posterior ratio for sample i and block j | |
| void | set_accept_rate (double rate) |
| set the acceptance rate | |
| double | get_accept_rate (void) const |
| get the acceptance rate | |
Detailed Description
a list of Bayesian MCMC samples
This list stores additional data that are important for bayesian analysis.: 1. For each parameter sample, a sample from the respective psychometric function is stored. These samples can be considered samples from the posterior predictive distribution 2. For each sample from the posterior predictive distribution, the deviance is stored 3. the list allows to obtain the estimated bayesian p-value
Constructor & Destructor Documentation
| MCMCList::MCMCList | ( | unsigned int | N, | |
| unsigned int | nprm, | |||
| unsigned int | nblocks | |||
| ) | [inline] |
- Parameters:
-
N number of samples to be drawn nprm number of parameters in the model nblocks number of blocks in the experiment
Member Function Documentation
| void MCMCList::setppData | ( | unsigned int | i, | |
| const std::vector< int > & | ppdata, | |||
| double | ppdeviance | |||
| ) |
set up MCMCList
store a posterior predictive data set
- Parameters:
-
i index of the posterior predictive sample to be set ppdata posterior predictive data sample ppdeviance deviance associated with the posterior predictive sample
The documentation for this class was generated from the following files:
- src/mclist.h
- src/mclist.cc
Generated on Mon Jul 4 2011 14:52:04 for Psi++ by
1.7.1